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Arabidopsis Gene Family Information  

2011-04-07 16:03:11|  分类: 生物信息分析 |  标签: |举报 |字号 订阅

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Arabidopsis Gene Family Information [996 gene families ] and [8,331 genes].

We encourage users of TAIR to share their gene family data with the research community. To submit data for a gene family, please format your data as described in the Gene Family Data Submission page.

Please click on the links below to view the gene family of your choice. Alternatively, the gene families and genes are displayed in one tab delimited file in the FTP Downloads section.



Gene Family Name Family Count/
Gene Count
Submitter
14-3-3 family 1 family
13 members
R Ferl Laboratory
ABC Superfamily Subfamilies 8
Members 136
Paul Verrier
Freddie Theodoulou
Angus Murphy
ABI3VP1 Transcription Factor Family 1 families
11 members
AGRIS
AGC Kinase Gene Family 1 family
39 members
Laszlo Bogre, Laszlo Okresz
Aldehyde Dehydrogenase Gene Family 9 families
14 members
Dorothea Bartels
Hans-Hubert Kirch
Amino Acid/Auxin Permease AAAP Family 1 family
43 members
John Ward
Acyl Lipid Metabolism Gene Families 174 families
610 members
Fred Beisson
Alfin-like Transcription Factor Family 1 family
7 members
AGRIS
Antiporters 13 families
70 members
John Ward
Antiporter Super Family 1 subfamily
28 members
Heven Sze
Kendal Hirschi
H Sze Laboratory
K Hirschi Laboratory
Aquaporins 2 families
35 members
John Ward
ARIADNE family 3 subfamilies
16 members
Marie-Theres Hauser
ARR-B 1 families
15 members
AGRIS
ARF Transcription Factor Family 1 families
24 members
AGRIS
ARID Transcription Factor Family 1 families
7 members
AGRIS
AP2-EREBP Transcription Factor Family 1 families
138 members
AGRIS
AS2 family 1 family
42 members
Yasunori Machida
AtRKD Transcription Factor Family 1 families
5 members
AGRIS
B3 DNA Binding Superfamily 1 family
87 members
Marcio Alves-Ferreira
Elisson Romanel
BBR/BPC Transcription factor family 1 family
7 members
Dierk Wanke
bHLH Transcription Factor Family 1 families
161 members
AGRIS
Basic Helix-Loop-Helix Transcription Factor Gene Family 1 family
162 members
Bernd Weisshaar
Basic region leucine zipper (bZIP) Transcription Factor Gene Family 1 family
75 members
Marc Jakoby
bZIP Transcription Factor Family 1 families
73 members
AGRIS
BZR Transcription Factor Family 1 families
6 members
AGRIS
Calcium Dependent Protein Kinase 1 family
34 members
J Sheen Laboratory
Calmodulin-binding Proteins 17 families
100 members
Vaka S Reddy,
Gul Shad Ali,
ASN Reddy
C2C2-CO-like Transcription Factor Family 1 families
30 members
AGRIS
C2C2-Dof Transcription Factor Family 1 families
36 members
AGRIS
C2C2-Gata Transcription Factor Family 1 families
30 members
AGRIS
C2C2-YABBY Transcription Factor Family 1 families
6 members
AGRIS
C2H2 Transcription Factor Family 1 families
211 members
AGRIS
C3H Transcription Factor Family 1 families
165 members
AGRIS
Carbohydrate Esterase 5 families
98 members
B. Henrissat,
P. Coutinho, E. Deleury
CAMTA Transcription Factor Family 1 families
6 members
AGRIS
CBL-interacting serine-threonine protein kinases 1 family
25 members
Joerg Kudla
CCAAT-DR1 Transcription Factor Family 1 families
2 members
AGRIS
CCAAT-HAP2 Transcription Factor Family 1 families
10 members
AGRIS
CCAAT-HAP3 Transcription Factor Family 1 families
10 members
AGRIS
CCAAT-HAP5 Transcription Factor Family 1 families
13 members
AGRIS
Cell Wall Biosynthesis 8 families
52 members
Todd Richmond
Chloroplast and Mitochondria Gene Families 16 families
50 members
John Ward
COBRA Gene Family 2 families
12 members
Philip Benfey
Core Cell Cycle Gene Families 7 families
61 members
Klaas Vandepoele
Core DNA Replication Machinery Family 1 family
61 members
Randall Shultz
Linda Hanley-Bowdoin Laboratory
CPP Transcription Factor Family 1 families
8 members
AGRIS
Cytochrome P450 69 families
256 members
S. Bak,
D. Nelson,
Mary Schuler
Cytochrome b5 1 family
7 members
Soren Bak
Cytoplasmic Ribosomal Protein Gene Family 79 families
255 members
Julia Bailey-Serres
Cytoskeleton Gene Families 2 families
15 members
Richard Meagher
DOF Gene Family 1 family
37 members
Shuichi Yanagisawa
E2F-DP Transcription Factor Family 1 families
8 members
AGRIS
EIL Transcription Factor Family 1 families
6 members
AGRIS
EF-hand Containing Proteins 8 families
234 members
Irene S Day,
Vaka Reddy,
Gul Shad Ali,
ASN Reddy
Equilibrative Nucleoside Transporter Gene Family (ENT) 1 family
8 members
Torsten Moehlmann
Eukaryotic Initiation Factors Gene Family 44 families
100 members
Karen Browning
Expansin Gene Family 4 families
36 members
Daniel Cosgrove
EXO70 exocyst subunit family 1 family
23 members
Viktor Zarsky
F-Box Gene Family 1 family
4 members
Claus Schwechheimer
FH2 protein (formin) Gene Family 1 family
21 members
Fatima Cvrckova
FtsH Gene Family 1 family
12 members
Adi Zaltsman
G2-like Transcription Factor Family 1 families
40 members
AGRIS
GeBP Transcription Factor Family 1 families
16 members
AGRIS
Glutamine Dumper (GDU) Family 1
7 members
Guillaume Pilot,
Wolf Frommer Laboratory at Stanford
Glycoside Hydrolase 31 families
379 members
B. Henrissat,
P. Coutinho, E. Deleury
Glycosyltransferase 28 families
361 members
B. Henrissat,
P. Coutinho, E. Deleury
GRAS Gene Family1 family
33 members
Cordelia Bolle
GRAS Transcription Factor Family 1 families
33 members
AGRIS
GRF Transcription Factor Family 1 families
9 members
AGRIS
Glutathione S-transferase Gene Family7 families
53 members
Pia G. Sappl, Harvey Millar, Karam B. Singh
Heat shock transcription factors Hsfs1 family
21 members
Lutz Nover
Histidine Kinase Gene Family1 family
16 members
J Sheen Lab
Histidine Phosphotransfer Proteins1 family
6 members
J Sheen Lab
Homeobox Transcription Factor Family 1 families
91 members
AGRIS
HRT Transcription Factor Family 1 families
3 members
AGRIS
HSF 1 families
21 members
AGRIS
IDZ Gene Family1 family
11 members
Thomas Merkle
Inorganic Solute Cotransporters16 families
84 members
John Ward
Ion Channels7 families
61 members
John Ward, Benoiit Lacombe
IQD Protein Family1 family
33 members
Steffen Abel
JUMONJI Transcription Factor Family 1 families
5 members
AGRIS
Lateral Organ Boundaries Gene Family1 family
43 members
B. Shuai, C. Reynaga-Pena, P. Springer
Leucine-rich Repeat extensin Gene Families2 families
11 members
Christoph Ringli
Lipid Metabolism Gene Families28 families
98 members
John Ward
Kinesins gene family1 family
61 members
A. S. N. Reddy, Irene Day
MADS Transcription Factor Family 1 families
109 members
AGRIS
MADS-box Gene Family1 family
108 members
Stefan de Folter
MADS like Gene Family1 family
16 members
Stefanie De Bodt
Type I MADS-box Gene Family1 family
46 members
Stefanie De Bodt
Major Intrinsic Protein MIP1 family
38 members
John Ward
MAP Kinase Gene Family1 family
20 members
J Sheen Lab
MAP Kinase Kinase Gene Family1 family
10 members
J Sheen Lab
MAP Kinase Kinase Kinase3 sub families
80 members
Laszlo Bogre, Laszlo Okresz
MAP Kinase Kinase Kinase Kinase1 family
10 members
Laszlo Bogre, Laszlo Okresz
Mechanosensitive Ion Channel Family1 family
10 members
Elizabeth Haswell
Miscellaneous Gene Families108 families
443 members
John Ward
MLO family1 family
15 members
Ralph Panstruga
Monolignol Biosynthesis Gene Families1 family
61 members
Jereon Raes
Monosaccharide Transporter(-like) Gene Family7 families
53 members
Norbert Sauer
MRS2 Gene Family1 family
11 members
Volker Knoop, Richard Gardner
MYB family1 family
133 members
B Weisshaar Laboratory
MYB Transcription Factor Family 1 families
131 members
AGRIS
MYB-Related Transcription Factor Family 1 families
2 members
AGRIS
Myosins gene family1 family
17 members
A. S. N. Reddy, Irene Day
NAC Transcription Factor Family 1 families
96 members
AGRIS
NADPH P450 reductases1 family
3 members
Soren Bak
Nicotianamine Synthase Gene Family1 family
4 members
Petra Bauer, Rudiger Hell
NLP Transcription Factor Family 1 families
9 members
AGRIS
Nodulin-like Gene Family3 families
64 members
John Ward
Non-SMC Element family1 family
2 members
Koichi Watanabe
Nucleobase Ascorbate Transporter Gene Family1 family
12 members
Ulf-Ingo Flugge
Orphan Transcription Factor Family 1 families
2 members
AGRIS
Organic Solute Cotransporters35 families
279 members
John Ward
Peroxidase, class III1 family
73 members
Michael Tognolli
PHD Transcription Factor Family 1 families
11 members
AGRIS
PHD Gene Family 1 subfamily
5 members
C Dean Laboratory
Phospholipase D Gene Family (Zarsky group)2 sub families
12 members
V Zarsky Laboratory
Phospholipase D Gene Family (Wang group)1 family
12 members
X. Wang
Phytocyanin Superfamily1 super family
22 members
Kiyoshi Mashiguchi
Plant Defensins Gene Families3 families
15 members
Bart Thomma
Polysaccharide Lyase2 families
35 members
B. Henrissat, P. Coutinho, E. Deleury
Pollen Coat Proteome4 families
11 members
J. A. Mayfield, A. Fiebig, S.E. Johnstone, D. Preuss
PP2C-type Phosphatase Gene Family1 family
76 members
Irute Meskiene
Primary Pumps ATPases12 families
83 members
John Ward
Primary Pumps ATPases(2)2 subfamilies
32 members
Heven Sze
Xiyan Li
H Sze Laboratory
Protein tyrosine phosphatase (PTP) family1 family
28 members
Sheng Luan, S Luan Laboratory
PRT Gene Family4 families
15 members
Ralf Boldt
Rapid Response to Elicitors1 family
4 members
Marta Berrocal-Lobo
Plinio Guzman
RAV Transcription Factor Family 1 families
11 members
AGRIS
RAD5/RAD16-like Gene Family1 family
10 members
Holger Puchta
RCI2 Gene Family1 family
8 members
Julio Salinas
Receptor kinase-like Gene Family1 family
307 members
John Ward
REM Transcription Factor Family 1 families
21 members
AGRIS
Response Regulator Gene Family 3 families
32 members
J Sheen Lab
SBP Transcription Factor Family 1 families
16 members
AGRIS
SBP-box Gene Family 1 family
17 members
Peter Huijser
Single Myb Histone (SMH) Gene Family 1 family
5 members
Hank Bass
SNARE and Associated Proteins 27 families
68 members
Anton Sanderfoot
Strubbelig Receptor Gene Family 1 family
9 members
Kay Schneitz
Structural Maintenance of Chromosomes family 1 family
3 members
Koichi Watanabe
Subtilisin-like Serine Gene Family 1 family
55 members
Thomas Altman
Carsten Rauntengarten"
Sucrose Transporter Gene Family 1 family
9 members
Norbert Sauer
Sulfurtransferasese/Rhodanese 1 family
18 members
Jutta Papenbrock
TCP Transcription Factor Family 1 families
24 members
Pilar Cubas
Tify Gene Family 1 families
18 members
Lieve Gheysen
Trehalose Biosynthesis Gene Families2 families
12 members
Barbara Leyman
Trihelix Transcription Factor Family 1 families
29 members
AGRIS
TUB Transcription Factor Family 1 families
10 members
AGRIS
U-box Gene Family1 family
61 members
Ken Shirasu
VOZ-9 Transcription Factor Family 1 families
2 members
AGRIS
Whirly Transcription Factor Family 1 families
3 members
AGRIS
Wox Gene Family1 family
14 members
Thomas Laux
WRKY Transcription Factor Superfamily8 families
74 members
Imre Somssich
WRKY Transcription Factor Family 1 families
72 members
AGRIS
Xyloglucan Fucosyltransferase11 family
13 members
N Raikhel Laboratory, M. O'Neill, A. Faik, K. Keegstra, I Wilson
Zinc finger-homeobox gene family2 families
17 members
Wei Hu
ZF-HD Transcription Factor Family 1 families
15 members
AGRIS
more information pls links to:http://www.arabidopsis.org/browse/genefamily/index.jsp
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