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Tablet:Next Generation Sequence Assembly Visualization  

2011-11-02 10:21:12|  分类: 生物信息分析 |  标签: |举报 |字号 订阅

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Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.

Tablet Screenshot

Visit the download page to get the latest version of Tablet (1.11.11.01; 1st November 2011) now.

Please cite: Milne, I, Bayer, M, Cardle, L, Shaw, P, Stephen, G, Wright, F and Marshall, D. 2010. Tablet - next generation sequence assembly visualization. Bioinformatics 26(3), 401-402.

Tablet features:

  • High-performance visualization and data navigation.
  • Display of reads in both packed and stacked formats.
  • File format support for ACE, AFG, MAQ, SOAP2, SAM, BAM, FASTA, FASTQ, and GFF3.
  • Import GFF3 features and quickly find/highlight/display them.
  • Search and locate reads by name or subsequence across entire data sets.
  • Paired end visualization support (for SAM/BAM).
  • Entire-contig overviews, showing data layout or coverage information.
  • Simple install routine via auto-updating graphical installers.
  • Support for Windows, Apple Mac OS X, Linux and Solaris, in 32 and 64-bit.

You can get a full list of recent new additions, changes or bug fixes by reading through the What's New list.

via:http://bioinf.scri.ac.uk/tablet/

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